@rj45
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Jan 12 · 13 min read · At MiraOmics we look at a lot of H5AD files. We have a database of over a thousand of them, not to mention several of the public data sources. Pretty much every time I have a new file, the first thing I want to do is run a few queries on it to under...
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Jul 28, 2025 · 10 min read · Introduction We recently built a cell-typer model based on a subset of the CellXGene V2 dataset. This model is a stepping stone towards a “universal” cell-typer model that will allow us to annotate cell types (and other properties) based on single ce...
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Jul 5, 2025 · 7 min read · Introduction We recently built a cell-typer model based on a subset of the CellXGene V2 dataset. This model is a stepping stone towards a “universal” cell-typer model that will allow us to annotate cell types (and other properties) based on single ce...
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Jun 28, 2025 · 5 min read · Introduction We recently built a cell-typer model based on a subset of the CellXGene V2 dataset. This model is a stepping stone towards a “universal” cell-typer model that will allow us to annotate cell types (and other properties) based on single ce...
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Mar 5, 2025 · 9 min read · In the spirit of “Learning in Public,” and “learning exhaust,” I’m adding “Lab Notes” blog posts that chronicle little discoveries or failures that I have along the way to a larger goal. This is a followup to my previous Lab Notes: Comparing GenePT a...
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