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Best JS framework is:

• thinking,
• vanilla JS/ES6 (Use rollup.js with npm-resolve and babel plugins)
• and small libraries. (Use latest web standards and APIs, add polyfills when required)

You also:

1. will solve your problem "how to remove X feature from framework"
2. your app will be lighter, faster especially on mobiles and areas with slow Internet connection (Use also nginx, HTTPS and HTTP2 for better perfomance)
3. No "Gorilla and banana problem"
4. Everyone will be happy from developers to businessmans today and in next 10 years

I recommend to structure code using:

1. Object literals, no prototypes, "classes", "new"
2. Composition over inheritance (Object.assign(), Object.create() )